Information for 3-GACTCGATTTCCC (Motif 4)

A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C G T A C T G A A C G T A G T C C T A G C G T A C T A G C A G T A G T C
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 21.7bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GACTCGATTTCCC
-ACTACAATTCCC
 A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GACTCGATTTCCC
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GACTCGATTTCCC---
------HTTTCCCASG
 A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GACTCGATTTCCC---
------ATTTCCTGTN
 A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GACTCGATTTCCC-------
AACTACAATTCCCAGAATGC
 A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACTCGATTTCCC---
TNNNATGATTTCNNCNN
 A C G T A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GACTCGATTTCCC
AGTTTCAGTTTC--
 A C G T A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GACTCGATTTCCC----
-----VDTTTCCCGCCA
 A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GACTCGATTTCCC
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GACTCGATTTCCC-------
RACTACAACTCCCAGVAKGC
 A C T G G T C A A G T C A C G T A G T C A C T G C G T A A G C T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C