Information for 2-AGCATCCTGGATC (Motif 3)

C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C
Reverse Opposite:
C T A G G T C A A C G T A G T C A G T C C G T A A C T G A C T G C G T A A C G T A T C G G T A C A C G T
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 17.8bp
Average Position of motif in Background39.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCATCCTGGATC
-ACATCCTGNT--
 C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCATCCTGGATC
--CTTCCNGGAA-
 C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C
A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCATCCTGGATC
TACATCCGGGT--
 C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCATCCTGGATC--
GTACATCCGGATTTTT
 A C G T C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCATCCTGGATC-
--GRTGMTRGAGCC
 C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C A C G T
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCATCCTGGATC----
--TTTCCTGGAAAGNNN
 C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AGCATCCTGGATC--
-------NGGATTAN
 C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCATCCTGGATC-----
TCAGCACCATGGACAGCTCC
 A C G T A C G T C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGCATCCTGGATC
GATAACATCCTAGTAG
 A C G T A C G T A C G T C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGCATCCTGGATC-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C G T A C A T G A T G C C G T A C G A T A G T C A G T C C G A T A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C