Information for 3-TGTTTCTTAAGCA (Motif 5)

A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T C G T A C G T A A C T G C T G A C T G A C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 26.1bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTTTCTTAAGCA------
--TNNATTATGCATANNTT
 A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTCTTAAGCA
NNTTTTTCTTATNT-
 A C G T A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGTTTCTTAAGCA
TATTGTTTATT-----
 A C G T A C G T A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTTTCTTAAGCA
-ANTTCTNNAGAA
 A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTTTCTTAAGCA
TGTTTATTT----
 A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTCTTAAGCA
ANGTTACATAA---
 A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTCTTAAGCA
CBTGTTTAYAWW---
 A C G T A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGTTTCTTAAGCA
NTNTTGTTGTTTGTN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTCTTAAGCA
TTGTTTAC------
 A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTCTTAAGCA--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A G C T A G C T G T A C C G A T A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G