Information for 1-CTCSCAGCTG (Motif 3)

A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A T G C G C A T A C T G A T G C A T C G C G T A C T A G
p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.797
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif523.2
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets46.4 +/- 26.2bp
Average Position of motif in Background50.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CTCSCAGCTG-
-NNACAGCTGC
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.85
Offset:2
Orientation:forward strand
Alignment:CTCSCAGCTG--
--CGCAGCTGCG
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CTCSCAGCTG--
NNVVCAGCTGBN
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CTCSCAGCTG-
-NNVCAGCTGB
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T
A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.83
Offset:3
Orientation:forward strand
Alignment:CTCSCAGCTG---
---ACAGCTGTTN
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.82
Offset:3
Orientation:forward strand
Alignment:CTCSCAGCTG---
---NCAGCTGCTG
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CTCSCAGCTG-
-NAHCAGCTGD
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CTCSCAGCTG--
-NNGCAGCTGTC
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:CTCSCAGCTG---
---CCAGCTGTTN
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CTCSCAGCTG-----
--TGCAGCTGTCCCT
 A G T C C G A T A T G C A T C G A G T C C G T A A T C G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T