Information for 1-TCAACATTTACAT (Motif 2)

A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T
Reverse Opposite:
C G T A A C G T A C T G G A C T G C T A C G T A T G C A A G C T A C T G A C G T C G A T C A T G C G T A
p-value:1e-12
log p-value:-2.843e+01
Information Content per bp:1.781
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.8 +/- 23.0bp
Average Position of motif in Background48.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCAACATTTACAT-
-----ATTTGCATA
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCAACATTTACAT--
---TAATTTGCATAA
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCAACATTTACAT-
--BTVATTWGCATA
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCAACATTTACAT--
-----ATTTGCATAA
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCAACATTTACAT--
--TTCATTTGCATAT
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCAACATTTACAT---
----AATTTGCATANT
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCAACATTTACAT-
--CTCATTTGCATW
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCAACATTTACAT-
-----ATTTGCATA
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCAACATTTACAT-
---ATATTTACATA
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCAACATTTACAT----
--AACAATAACATTGTT
 A C G T G A T C C G T A G T C A G T A C C T G A A C G T A C G T C A G T C G T A G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T