Information for 5-TGAGACATTTATC (Motif 12)

C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
Reverse Opposite:
C T A G C G T A A C G T C G T A C G T A C G T A C G A T A C T G A C G T A G T C A C G T A G T C C G T A
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 12.9bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGAGACATTTATC
---ANCGTTTANN
 C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGACATTTATC-
--RGCCATYAATCA
 C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C G T
A C G T A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAGACATTTATC
NTTGATACATT----
 A C G T A C G T C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAGACATTTATC
TGAGTCATTTC--
 C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGACATTTATC
ATGAGTCAT-----
 A C G T C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGAGACATTTATC
GATGAGTCATN----
 A C G T A C G T C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGAGACATTTATC--
------TTTTATTGC
 C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAGACATTTATC
---NNCAATTANN
 C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGACATTTATC
ATGAGTCATNTNNT
 A C G T C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGACATTTATC---
-NAGATWNBNATCTNN
 C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C