Information for 4-AAACCATTAA (Motif 10)

T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A
Reverse Opposite:
A C G T G A C T C G T A G C T A A C G T C A T G A C T G A C G T C G A T A G C T
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.828
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif298.8
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets36.3 +/- 21.9bp
Average Position of motif in Background48.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAACCATTAA
AAACMATTAN
 T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AAACCATTAA--
AAAAACCATTAAGG
 A C G T A C G T T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAACCATTAA---
ATAAACAATTAAACA
 A C G T A C G T T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAACCATTAA---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

VENTX/MA0724.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AAACCATTAA
-ACCGATTAG
 T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAACCATTAA-
---YCATTAMC
 T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAACCATTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAACCATTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAACCATTAA-
-GGCCATTAAC
 T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAACCATTAA---
CAAAATCAATTAATTT
 A C G T A C G T A C G T T C G A C G T A C G T A T G A C G T A C G T C A C A G T C G A T C T G A C G T A A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T