Information for 15-CCCCTTCATGAAA (Motif 24)

A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A
Reverse Opposite:
G A C T A G C T A C G T G A T C G C T A A C G T A C T G T C G A C G T A T C A G A C T G T A C G T A C G
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.662
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif355.5
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets45.0 +/- 24.4bp
Average Position of motif in Background53.0 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCCTTCATGAAA--
-NNTNTCATGAATGT
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T A C G T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCCTTCATGAAA-
GACCACATTCATACAAT
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCCCTTCATGAAA---
------ACTGAAACCA
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCATGAAA-
NNNTTTCCTGGAAA
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCCTTCATGAAA-
---CTTCTGGGAAA
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCCTTCATGAAA--
-NNCTTCCNGGAAGN
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCCCTTCATGAAA--
---TTTCCNGGAAAN
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCCCTTCATGAAA-----
---TTTCCTGGAAAGNNN
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCCTTCATGAAA----
---TTTCCTAGAAAGCA
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CCCCTTCATGAAA
-------ATTAAA
 A G T C A G T C G T A C A G T C G C A T A G C T T A G C T G C A C A G T C T A G G T C A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A