Information for 10-CCCGCAGCTT (Motif 23)

A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T
Reverse Opposite:
T G C A C T G A A T C G A T G C A C G T A C T G G T A C A T C G A C T G A T C G
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.847
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif180.8
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets51.7 +/- 23.7bp
Average Position of motif in Background49.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CCCGCAGCTT--
--CGCAGCTGCG
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T A C G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGCTT-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCAGCTT
TACCCGCATN--
 A C G T A C G T A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCCGCAGCTT--
-NNGCAGCTGTC
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCCGCAGCTT-
-CAGCAGCTGN
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCGCAGCTT---
---GCAGCTGTNN
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCGCAGCTT--
-NNGCAGCTGTT
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCCGCAGCTT--
NNAGCAGCTGCT
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCAGCTT
GTACCCGCATN--
 A C G T A C G T A C G T A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCCGCAGCTT
--ANCAGCTG
 A T G C A G T C A T G C C A T G A G T C G T C A A T C G A T G C A G C T A C G T
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G