Information for 9-CTGCCCAGCTGGC (Motif 18)

A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C
Reverse Opposite:
A T C G T G A C A G T C C T G A A T C G A T G C C G A T A C T G A C T G T A C G A T G C C G T A A T C G
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.709
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif247.1
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets39.9 +/- 24.3bp
Average Position of motif in Background52.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC
--NNVCAGCTGB-
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C
A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC--
---NVCAGCTGBBNN
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC--
---GCCAGCTGBTNB
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC
--NAACAGCTGT-
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C
A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC-
----CCAGCTGTTN
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CTGCCCAGCTGGC
--NNACAGCTGC-
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C
A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC
--NNGCAGCTGTC
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CTGCCCAGCTGGC-
----HCAGCTGDTN
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGCCCAGCTGGC
---GCCATCTGTT
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTGCCCAGCTGGC---
---TGCAGCTGTCCCT
 A T G C G C A T A T C G A T G C G T A C G T A C C G T A A T C G A T G C A G C T A C T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T