Information for 2-CACATGCCCC (Motif 6)

A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G A C T G A G T C C G T A A C G T A C T G A C G T A C T G
p-value:1e-13
log p-value:-3.099e+01
Information Content per bp:1.970
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.4 +/- 27.3bp
Average Position of motif in Background55.0 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCCCC
GGTCACATGAC--
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CACATGCCCC
SNGCACCTGCHS-
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CACATGCCCC--
---ATGCCCACC
 A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACATGCCCC
GACACGTGCC--
 A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACATGCCCC
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCCCC
AAGCACATGG---
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACATGCCCC
KCACGTGMCN-
 A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACATGCCCC
GGCACGTGNC--
 A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CACATGCCCC
CGGCACGTGCCA-
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCCCC
TCACGTGACC-
 A C G T A G T C C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A T G C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T