Information for 3-TGCTATGMAAACT (Motif 5)

C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T
Reverse Opposite:
C G T A C T A G A G C T A C G T C G A T A C G T A G T C C G T A C A G T C G T A T A C G A G T C C G T A
p-value:1e-13
log p-value:-3.222e+01
Information Content per bp:1.739
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.1 +/- 20.8bp
Average Position of motif in Background56.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGCTATGMAAACT
---TATGCAAAT-
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T
A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGCTATGMAAACT
---TATGCAAAT-
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATGMAAACT
CATTGTTATGCAAAT-
 A C G T A C G T A C G T C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCTATGMAAACT---
TTGTATGCAAATTAGA
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGCTATGMAAACT
--ATATGCAAAT-
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGCTATGMAAACT
--TTATGCAAAT-
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCTATGMAAACT---
TTGTATGCAAATTAGA
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCTATGMAAACT---
TTGTATGCAAATTAGA
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCTATGMAAACT-
--TTATGCAAATTA
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCTATGMAAACT-
--TTATGCAAATTA
 C G A T A C T G A T G C A C G T G T C A A C G T C T A G G T C A G C T A C G T A T C G A G A T C C G A T A C G T
A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A