Information for 18-GGCCGGGCTTCAG (Motif 21)

A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G G T C A C T G A A C T G A G T C A G T C A T G C A C T G A T C G A G T C A G T C
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.6 +/- 29.4bp
Average Position of motif in Background62.9 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCCGGGCTTCAG
AGGGGGCGGGGCTG---
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGGGCTTCAG
GGGGGCGGGGCC----
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGCCGGGCTTCAG
------GCTTCC-
 A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCCGGGCTTCAG
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCCGGGCTTCAG
ACATGCCCGGGCAT---
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCCGGGCTTCAG
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGCCGGGCTTCAG
NAAGGGGGCGTGGCTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCGGGCTTCAG
AGGCCTAG------
 A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCCGGGCTTCAG
GAGSCCGAGC-----
 A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GGCCGGGCTTCAG
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C A T C G A C T G A C T G A G T C A G C T A C G T A G T C C T G A A C T G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T