Information for 2-CRGGGGGCGCTST (Motif 2)

A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
Reverse Opposite:
T C G A A T G C C T G A A T C G A T G C C A T G G T A C A G T C A G T C A G T C A T G C G A C T T A C G
p-value:1e-57
log p-value:-1.328e+02
Information Content per bp:1.663
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif11.09%
Number of Background Sequences with motif602.4
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets51.0 +/- 21.3bp
Average Position of motif in Background50.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CRGGGGGCGCTST---
TTGGGGGCGCCCCTAG
 A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CRGGGGGCGCTST--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CRGGGGGCGCTST-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CRGGGGGCGCTST
----CGGAGC---
 A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CRGGGGGCGCTST
-GGGGGGGG----
 A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CRGGGGGCGCTST
TGTCAGGGGGCG----
 A C G T A C G T A C G T A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CRGGGGGCGCTST
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CRGGGGGCGCTST
-RGKGGGCGKGGC
 A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CRGGGGGCGCTST
RGKGGGCGGAGC---
 A C G T A C G T A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CRGGGGGCGCTST
TCGGTGGTCGCN--
 A C G T A T G C C T G A A T C G C T A G C T A G A C T G A C T G G T A C A T C G A T G C G A C T T A C G A G C T
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T