Information for 4-YGGGAATTGTRGT (Motif 6)

A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T
Reverse Opposite:
C T G A A G T C G A T C C G T A A G T C T C G A C G T A G C A T A C G T A G T C A G T C A G T C C T A G
p-value:1e-15
log p-value:-3.477e+01
Information Content per bp:1.796
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif45.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.9 +/- 25.0bp
Average Position of motif in Background45.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:YGGGAATTGTRGT
-GGGAATTGTAGT
 A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------YGGGAATTGTRGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------YGGGAATTGTRGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:YGGGAATTGTRGT---
----NNHTGTGGTTWN
 A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YGGGAATTGTRGT
CSTGGGAAAD-----
 A C G T A C G T A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YGGGAATTGTRGT
GGCGGGAARN-----
 A C G T A C G T A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----YGGGAATTGTRGT
CWGGCGGGAA-------
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---YGGGAATTGTRGT
TGGCGGGAAAHB----
 A C G T A C G T A C G T A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:YGGGAATTGTRGT---
------CTGTGGTTTN
 A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YGGGAATTGTRGT--
-----NNTGTGGTTT
 A G T C A C T G A C T G C T A G G T C A C G T A C G A T A C G T A C T G A C G T C T A G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T