Information for 16-GAGGGAAACAAGA (Motif 20)

A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T C A G T A T C G A C G T A C G T A C G T A G T C G T A C G T A C A C G T A G T C
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.928
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 24.5bp
Average Position of motif in Background57.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAAACAAGA
GGCGGGAARN----
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAAACAAGA-
TGACANARRCCAGRC
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAAACAAGA
GGGCGGGAAGG----
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGGGAAACAAGA
--TGTAAACAGGA
 A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGGGAAACAAGA
-ACTGAAACCA--
 A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGGGAAACAAGA---
----GWAAYHTGAKMC
 A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAGGGAAACAAGA---
----GWAAYHTGABMC
 A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAAACAAGA
TGGCGGGAAAHB---
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGGGAAACAAGA
-ATGTAAACADGS
 A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAGGGAAACAAGA
---GTAAACAWBN
 A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A T G C G T C A C G T A C T A G C G T A
A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A