Information for 13-GTGGTTARCCACM (Motif 19)

A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
Reverse Opposite:
C A G T A C T G C G A T A C T G A C T G A G T C A G C T C G T A C T G A A G T C A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.798
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 27.2bp
Average Position of motif in Background41.6 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTARCCACM
NNTGTGGTTT------
 A C G T A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTARCCACM
CTGTGGTTTN-----
 A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTARCCACM
GCTGTGGTTT------
 A C G T A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTARCCACM
NNHTGTGGTTWN-----
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTARCCACM
GTCTGTGGTTT------
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGTTARCCACM
GTGGAT-------
 A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGGTTARCCACM--
CCTTAGTTAACTAAAAT
 A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTARCCACM
TTGCGGTTT------
 A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTARCCACM
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTARCCACM
TTTGCGGTTT------
 A C G T A C G T A C G T A C T G C G A T A C T G A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A G T A C G T C A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T