Information for 10-CGCAGAACAC (Motif 17)

G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G A T A C G T A G T C G C A T A T C G A G T C C A T G
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.849
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.6 +/- 23.3bp
Average Position of motif in Background51.4 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCAGAACAC------
AGCGGCACACACGCAA
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCAGAACAC------
CGAAGCACACAAAATA
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCAGAACAC
CCAGGAACAG
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCAGAACAC----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCAGAACAC-----
-GCAAAACATTACTA
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCAGAACAC
--AAGGTCAC
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGCAGAACAC------
CATAAGACCACCATTAC
 A C G T G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGCAGAACAC-------
--VAGRACAKWCTGTYC
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGCAGAACAC---
ATGTCACAACAACAC
 A C G T A C G T G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGCAGAACAC-------
--AAGAACATWHTGTTC
 G T A C C T A G A T G C C G T A A C T G G T C A C G T A A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C