Information for 16-CACCGCCAAGGCA (Motif 30)

A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G A T A C T G
p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 15.8bp
Average Position of motif in Background60.7 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR3/MA0732.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACCGCCAAGGCA--
CTACGCCCACGCACT
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACCGCCAAGGCA
---TGCCAA----
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACCGCCAAGGCA
--ACGCCCACGCA
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A
A C G T A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACCGCCAAGGCA
-CGTGCCAAG---
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACCGCCAAGGCA---
TTACGCCCACGCATTT
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACCGCCAAGGCA-
TCCCAGMCRAGCCCC
 A C G T A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CACCGCCAAGGCA-
----NTCAAGGTCA
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACCGCCAAGGCA
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACCGCCAAGGCA---
--TTGCCATGGCAACN
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACCGCCAAGGCA
-GGTGCCAAGT--
 A G T C C G T A A G T C G T A C A C T G A G T C A G T C C G T A C G T A A C T G A C T G A G T C C T G A
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T