Information for 11-TAGGTGACAAAGTGCA (Motif 19)

A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C C G T A A G T C A C G T A C G T A C G T A C T G A C G T G A T C C G T A A T G C A G T C C G A T G T C A
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.8 +/- 18.1bp
Average Position of motif in Background26.9 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA
CANAGNNCAAAGTCCA
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA
-AGAGTCCAAAGTCCA
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA--
--GGGGTCAAAGTCCAAT
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGGTGACAAAGTGCA---
NGAGGTCANNGAGTTCANNN
 A C G T A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA----
----GGCAAAAGTCCAATAA
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA
-AGGTGTCA-------
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TAGGTGACAAAGTGCA
------ACAAAG----
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA
-AGGTGTGAAM-----
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TAGGTGACAAAGTGCA---
----GAAAAAATTGCAAGG
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGGTGACAAAGTGCA
-ARNTGACA-------
 A C G T C G T A A C T G A T C G C G A T C A T G G T C A A G T C C G T A G T C A C G T A A C T G A C G T A C T G A G T C C G T A
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T