Information for 9-CAGCAGGTCTGGTGTG (Motif 21)

A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
Reverse Opposite:
A T G C G T C A A G T C C T G A A G T C A G T C C T G A A T C G C G T A A G T C A G T C A C G T A C T G A G T C A G C T A T C G
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.918
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.2 +/- 11.2bp
Average Position of motif in Background24.3 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGCAGGTCTGGTGTG
---CAGGTGAGG----
 A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCAGGTCTGGTGTG
SDGCAGGTGCNS----
 A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGTCTGGTGTG
DCTCAGCAGG---------
 A C G T A C G T A C G T A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGCAGGTCTGGTGTG
-AACAGGTGT------
 A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGTCTGGTGTG
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGTCTGGTGTG
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTCTGGTGTG
-NNCAGGTGCG-----
 A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAGCAGGTCTGGTGTG
-----GGTCTGGCAT-
 A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGGTCTGGTGTG
CACAGCAGGGGG------
 A C G T A C G T A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGTCTGGTGTG
-NNCAGGTGTN-----
 A T G C T C G A A C T G A G T C C G T A A C T G A C T G A C G T A T G C A G C T A C T G A C T G A G C T A C T G A C G T A T C G
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T