Information for 3-TTTCAGTTTC (Motif 3)

A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A C G T A T C G A T A G C C G A T A C T G C G T A C T G A C T G A
p-value:1e-20
log p-value:-4.629e+01
Information Content per bp:1.884
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif190.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets45.0 +/- 26.1bp
Average Position of motif in Background48.2 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTTC
ACTTTCACTTTC
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTTTC
AGTTTCAGTTTC
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTTC
ASTTTCASTTYC
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTTTC
AGTTTCAKTTTC
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTTC
RSTTTCRSTTTC
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.84
Offset:-6
Orientation:forward strand
Alignment:------TTTCAGTTTC-----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----TTTCAGTTTC-
TCAGTTTCATTTTCC
 A C G T A C G T A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTTC--
ANTTTCGCTTTCGN
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C A C G T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTTC
ASTTTCACTTCC
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTTC--
AGTTTCGGTTTCGN
 A C G T A C G T A G C T A G C T A C G T A G T C C G T A A T C G A G C T A C G T A G C T A G T C A C G T A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A