Information for 8-CGGCAGCTGGGGTGTT (Motif 20)

A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
Reverse Opposite:
C T G A G T C A A G T C C T G A A G T C A G T C T G A C A G T C C G T A A T C G A G T C A C G T A C T G A G T C A G T C A T C G
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 10.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTGGGGTGTT
-GACAGCTGCAG----
 A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAGCTGGGGTGTT
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCTGGGGTGTT
-CGCAGCTGCG-----
 A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGCAGCTGGGGTGTT
CAGCAGCTGN------
 A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCTGGGGTGTT
-NVCAGCTGBBNN---
 A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTGGGGTGTT
-AACAGCTGCAG----
 A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGGCAGCTGGGGTGTT
--GCAGCTGTNN----
 A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGCTGGGGTGTT
NGNGACAGCTGCN-----
 A C G T A C G T A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGCTGGGGTGTT
CACGGCAGTTGGTNN---
 A C G T A C G T A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGCAGCTGGGGTGTT
NNAGCAGCTGCT-----
 A C G T A T G C T A C G A C T G A G T C C G T A A C T G A T G C A C G T A C T G A C T G A C T G A C T G A G C T A C T G A C G T A G C T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T