Information for 13-ACGTTATTGG (Motif 18)

G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C G A T C T G A C G T A A T G C A C T G A C G T
p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.3 +/- 26.9bp
Average Position of motif in Background42.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ACGTTATTGG-----
---TGATTGGCTANN
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACGTTATTGG-------
--CTGATTGGTCNATTT
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

MSX2/MA0708.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGTTATTGG
--NTAATTGG
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGTTATTGG--
--CCGATTGGCT
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

EN2/MA0642.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACGTTATTGG-
-GNTAATTGGN
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGTTATTGG
--NTAATTGG
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACGTTATTGG
NTTTTATTGG
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACGTTATTGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Crem/MA0609.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTATTGG
TTACGTCATN--
 A C G T A C G T G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACGTTATTGG
--NTAATTGN
 G T C A G T A C A T C G A C G T A G C T C G T A A C G T A C G T C T A G A C T G
A C G T A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G