Information for 7-CTGAGGCTGCGGCGCG (Motif 17)

A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C T G A G T C A G T C A C T G A G T C C G T A A T C G A G T C A G T C A C G T A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.942
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 18.1bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGAGGCTGCGGCGCG
--CAGGCCNNGGCCNN
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:CTGAGGCTGCGGCGCG--
----------GGCGCGCT
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGAGGCTGCGGCGCG
---TGGGTGGGGC---
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGAGGCTGCGGCGCG
---DGGGYGKGGC---
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTGAGGCTGCGGCGCG
----GGGGGCGGGGCC
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGGCTGCGGCGCG
TGCCTGAGGCN--------
 A C G T A C G T A C G T A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTGAGGCTGCGGCGCG
---RGKGGGCGGAGC-
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGAGGCTGCGGCGCG
-GGCGGGGGCGGGGG-
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTGAGGCTGCGGCGCG
---TGGGTGTGGC---
 A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGGCTGCGGCGCG
NGCCTNAGGCN--------
 A C G T A C G T A C G T A G T C A C G T T C A G C G T A A C T G A C T G A T G C C G A T A C T G A G T C A C T G A C T G A G T C A C T G A G T C A C T G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T