Information for 6-GGCTGGACCTCCA (Motif 10)

A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G G T A C A G T C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 25.4bp
Average Position of motif in Background74.3 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGGACCTCCA-
TGCCTGCGYCMCCTT
 A C G T A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCTGGACCTCCA
GGGCGGGACC----
 A C G T A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTGGACCTCCA
-GCTCGGSCTC--
 A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCTGGACCTCCA----
CATAAGACCACCATTAC
 A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGACCTCCA
TWGTCTGV-------
 A C G T A C G T A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCTGGACCTCCA
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGACCTCCA
CTGTCTGG-------
 A C G T A C G T A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGCTGGACCTCCA---
----GGACCACCCACG
 A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGCTGGACCTCCA
----TGACCYCT-
 A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGACCTCCA
ADGGYAGYAGCATCT
 A C G T A C G T A C T G C A T G A G T C A C G T A C T G A T C G G T C A A G T C A G T C A C G T A G T C A G T C C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T