Information for 5-CTCCTGCAASAAW (Motif 9)

A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
Reverse Opposite:
C G A T C G A T A C G T A T G C A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A C T G
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 21.4bp
Average Position of motif in Background32.8 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCCTGCAASAAW--
CAATTGCAAAAATAT
 A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCTGCAASAAW-------
NNCCTGNAAAAAAAAAAAAA
 A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGCAASAAW
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCTGCAASAAW-------
NNCCTGNAAAAAAAAAAAAA
 A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGCAASAAW
NNCACCTGNN-----
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGCAASAAW
AACACCTGCT-----
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGCAASAAW
CGCACCTGCT-----
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTCCTGCAASAAW
-------AACAAT
 A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTCCTGCAASAAW
NNNCTTTCCAGGAAA---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCCTGCAASAAW
NATGTTGCAA----
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G A G T C C G T A C G T A T A C G C G T A C G T A C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T