Information for 5-RSAYGCSCKYGWTGSC (Motif 8)

C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C C G T A C G T A A T G C C T G A G T C A A C T G A T G C A C T G A G T C C T G A C G A T A T C G A G T C
p-value:1e-12
log p-value:-2.833e+01
Information Content per bp:1.807
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 14.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----RSAYGCSCKYGWTGSC
GTGCGCATGCGC--------
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:RSAYGCSCKYGWTGSC---
----------NTTGGCANN
 C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----RSAYGCSCKYGWTGSC
CTGCGCATGCGC--------
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--RSAYGCSCKYGWTGSC
ATAAAGGCGCGCGAT---
 A C G T A C G T C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--RSAYGCSCKYGWTGSC
NCANGCGCGCGCGCCA--
 A C G T A C G T C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--RSAYGCSCKYGWTGSC
GCGCCTGCGCA-------
 A C G T A C G T C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:RSAYGCSCKYGWTGSC
---GGCACGTGCC---
 C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.49
Offset:11
Orientation:forward strand
Alignment:RSAYGCSCKYGWTGSC-
-----------TTGGCA
 C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:RSAYGCSCKYGWTGSC--
----------CTTGGCAA
 C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:RSAYGCSCKYGWTGSC
-CACGCA---------
 C T A G A T G C C G T A A G C T A C T G A G T C A T C G A G T C A C G T A G C T A T C G C G A T A C G T A C T G A T G C A G T C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T