Information for 4-TGAGGCTTTTTGACHC (Motif 7)

A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C
Reverse Opposite:
A C T G C A T G A C T G A C G T A T G C C G T A C G T A C T G A C G T A C T G A C T A G A G T C A G T C A G C T A T G C C G T A
p-value:1e-12
log p-value:-2.833e+01
Information Content per bp:1.793
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 35.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC-
-TTGACCTTTTGACCTT
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC-
--TGACCTTTTGACCTC
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T
A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC
TAAGGCGTCTTG----
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC--
--TGACCTTTTGACCTTT
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC--
-NAAANTTATTGAANCAN
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T A C G T
A C G T G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGAGGCTTTTTGACHC-
-----CNTGTTTACATA
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGAGGCTTTTTGACHC---
----BSNTGTTTACWYWGN
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGAGGCTTTTTGACHC
----SCHTGTTTACAT
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C
A C G T A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC--
--------TTTGAAACCG
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGAGGCTTTTTGACHC
CNAGGCCT--------
 A C G T A T C G C T G A A C T G C T A G A G T C A G C T A C G T A G C T A C G T A C G T A T C G C G T A G T A C G A T C G T A C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T