Information for 3-GCCAGAGCTTTGGCGC (Motif 6)

A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A T G C A G T C C T G A C T G A C G T A A C T G A G T C A C G T A G T C A C G T A T C G A C T G A T G C
p-value:1e-12
log p-value:-2.833e+01
Information Content per bp:1.901
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 19.3bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:GCCAGAGCTTTGGCGC----
--------TTTGGCGCCAAA
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC------
-----NNNNTTGGCGCCGANNN
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC------
-----NNNNTTGGCGCCGANNN
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC---
-------TTTTCGCGCGAA
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC-
-------DTTTCCCGCC
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC-
--------NTTGGCANN
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCCAGAGCTTTGGCGC
GAGSCCGAGC--------
 A C G T A C G T A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC-
---TGACCTTTGACCCC
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGCTTTGGCGC
ATGCCAGACN--------
 A C G T A C G T A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCCAGAGCTTTGGCGC
--CNGTGATTTN----
 A T C G A G T C A T G C G T C A A C T G C G T A A C T G G T A C A C G T A G C T A G C T A C T G A T C G A G T C A C T G A G T C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T