Information for 3-AGCGTTGAGGCTT (Motif 4)

C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G A G T C A G T C A G C T A G T C C G T A G T C A A T G C A C T G A G T C A C G T
p-value:1e-12
log p-value:-2.900e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 33.8bp
Average Position of motif in Background70.5 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCGTTGAGGCTT
---NNTGTGGTTT
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGCGTTGAGGCTT-
---GATGAGTCATN
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGCGTTGAGGCTT
--GTCTGTGGTTT
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AGCGTTGAGGCTT-
-------AAGCTTG
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCGTTGAGGCTT
----ATGAGTCAT
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGCGTTGAGGCTT--
-------AGGCCTNG
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGCGTTGAGGCTT
ATGCCCTGAGGC--
 A C G T C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCGTTGAGGCTT
----TTGCGGTTT
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGCGTTGAGGCTT-----
--CGTTGGGGATTAGCCT
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGCGTTGAGGCTT
---TTTGCGGTTT
 C G T A C T A G A G T C A T C G C A G T A C G T C T A G C T G A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T