Information for 14-GMCAGGATTTTAK (Motif 25)

A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
Reverse Opposite:
G T A C A C G T C G T A C G T A C G T A C G T A A C G T G T A C A G T C A C G T A C T G C A T G T A G C
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.0 +/- 24.5bp
Average Position of motif in Background49.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GMCAGGATTTTAK
ANCAGGATGT---
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GMCAGGATTTTAK
--NGGGATTA---
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GMCAGGATTTTAK
CACAGN-------
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GMCAGGATTTTAK------
---NNANTTTTATTGGNNN
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GMCAGGATTTTAK
---NGGATTAN--
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GMCAGGATTTTAK
AAGTCAGCANTTTTN
 A C G T A C G T A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GMCAGGATTTTAK
---NGGATTAA--
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GMCAGGATTTTAK
AACAGGAAGT---
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GMCAGGATTTTAK----
-------TTTTATTRGN
 A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GMCAGGATTTTAK-
CTACTAGGATGTNNTN
 A C G T A C G T A T C G G T A C A G T C C G T A A C T G A C T G T G C A A C G T C G A T C G A T G A C T C G T A A C T G A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C