Information for 8-YAAATGRGGRCYC (Motif 13)

A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
Reverse Opposite:
C T A G C T G A A C T G G A C T A G T C A G T C A G C T A G T C C G T A A C G T A C G T A C G T C T A G
p-value:1e-11
log p-value:-2.654e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 30.3bp
Average Position of motif in Background33.3 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----YAAATGRGGRCYC
NNTNNACAATGGGANNN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:YAAATGRGGRCYC
-TAATGGCGGNC-
 A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YAAATGRGGRCYC---
NNNATTGGGGGTNTCCT
 A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:YAAATGRGGRCYC
----TGGGGA---
 A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YAAATGRGGRCYC
GCTAAACGGT-----
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----YAAATGRGGRCYC
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---YAAATGRGGRCYC
GGTCANYTGAGGWCA-
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-YAAATGRGGRCYC
CAAGATGGCGGC--
 A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----YAAATGRGGRCYC
WATGCAAATGAG-----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YAAATGRGGRCYC----
-NNNGGGGCGCCCCCNN
 A G T C C G T A C G T A C G T A A C G T A C T G C T G A A C T G A C T G C T G A A G T C A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A