Information for 3-WGTGGTTWCC (Motif 3)

C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
Reverse Opposite:
C T A G T C A G C G A T C G T A T C G A A G T C A G T C G T C A A T G C G C A T
p-value:1e-16
log p-value:-3.790e+01
Information Content per bp:1.712
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.36%
Number of Background Sequences with motif771.4
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets53.1 +/- 26.4bp
Average Position of motif in Background48.9 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--WGTGGTTWCC
NNTGTGGTTT--
 A C G T A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-WGTGGTTWCC
CTGTGGTTTN-
 A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---WGTGGTTWCC
GTCTGTGGTTT--
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--WGTGGTTWCC
GCTGTGGTTT--
 A C G T A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---WGTGGTTWCC
NNHTGTGGTTWN-
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-WGTGGTTWCC
TTGCGGTTT--
 A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--WGTGGTTWCC
TTTGCGGTTT--
 A C G T A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:WGTGGTTWCC
-GTGGAT---
 C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:WGTGGTTWCC-
TGTGGATTNNN
 C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------WGTGGTTWCC
AATNTTAAGTGGNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A C G T A C T G A C T G A G C T A C G T C G T A A G T C G A T C
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T