Information for 8-ATGCTGTGGTCACTGG (Motif 16)

G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
Reverse Opposite:
T A G C G A T C G C T A A T C G A C G T T A C G C T G A T A G C A G T C C G T A A G T C C T G A A C T G A G T C G C T A C A G T
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.745
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.8 +/- 23.0bp
Average Position of motif in Background52.8 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGTGGTCACTGG
NNTCCTGCTGTGNNN-----
 A C G T A C G T A C G T A C G T G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATGCTGTGGTCACTGG
--GCTGTGGTTT----
 G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGTGGTCACTGG
TNTCCTGCTGTGNNG-----
 A C G T A C G T A C G T A C G T G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGTGGTCACTGG
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGTGGTCACTGG
TCNCCTGCTGNGNNN-----
 A C G T A C G T A C G T A C G T G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGCTGTGGTCACTGG
--GCTGTG--------
 G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGCTGTGGTCACTGG
CCTGCTGAGH-------
 A C G T G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGCTGTGGTCACTGG
---CTGTGGTTTN---
 G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATGCTGTGGTCACTGG
-GTCTGTGGTTT----
 G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATGCTGTGGTCACTGG
GGCCYCCTGCTGDGH-------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A G T A C T G A G T C A G C T A C T G C G A T C T A G A C T G A G C T A G T C G T C A T A G C C A G T C T A G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T