Information for 12-AATGCTGCTACTA (Motif 13)

C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A
Reverse Opposite:
A C G T C G T A A C T G C G A T C T G A A C T G A G T C C G T A A C T G A T G C C G T A A C G T A G C T
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 30.9bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AATGCTGCTACTA----
--AGATGCTRCTRCCHT
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATGCTGCTACTA
CATGCGGGTAC--
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATGCTGCTACTA-----
--TNNTGCTACTGTNNNN
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AATGCTGCTACTA-----
--ACTTGCTACCTACACC
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATGCTGCTACTA-----
--ACATGCTACCTAATAC
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AATGCTGCTACTA
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATGCTGCTACTA
NATGTTGCAA---
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AATGCTGCTACTA-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AATGCTGCTACTA-----
--CNNNGCTACTGTANNN
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AATGCTGCTACTA-
---GCTGTTACCCT
 C T G A C G T A A C G T A T C G A G T C C G A T A C T G A G T C A G C T C G T A A G T C C G A T G T C A A C G T
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T