Information for 21-CACGCGTGACGTC (Motif 34)

T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
Reverse Opposite:
T A C G T G C A T A G C T A C G A G C T A T G C T G C A A T G C T A C G A T G C T A C G A C G T A T C G
p-value:1e-4
log p-value:-1.122e+01
Information Content per bp:1.410
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.4 +/- 28.2bp
Average Position of motif in Background28.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CACGCGTGACGTC
-NCACGTGACN--
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CACGCGTGACGTC
NNCGCGTGNN---
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CACGCGTGACGTC
NGCANTCATGCGTGACG--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CACGCGTGACGTC
--TGCGTG-----
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CACGCGTGACGTC
-NCACGTGACN--
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CACGCGTGACGTC
---NCGTGACN--
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------CACGCGTGACGTC
TGCAGTCATGCGTGACG--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.69
Offset:6
Orientation:forward strand
Alignment:CACGCGTGACGTC
------TGACGT-
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CACGCGTGACGTC
ATCACGTGAC---
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CACGCGTGACGTC--
---CGGTGACGTCAC
 T A G C T G C A A T G C T A C G A T G C T A C G A C G T T A C G T C G A A T G C A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C