Information for 9-CTGCCCCTCGCACGTG (Motif 28)

A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A T G C A C T G A C G T A C T G A G T C A T C G C G T A A C T G T C A G A T C G A C T G A G T C C T G A A T C G
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 13.4bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.66
Offset:9
Orientation:forward strand
Alignment:CTGCCCCTCGCACGTG-
---------GCACGTGA
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:9
Orientation:forward strand
Alignment:CTGCCCCTCGCACGTG---
---------KCACGTGMCN
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.66
Offset:9
Orientation:forward strand
Alignment:CTGCCCCTCGCACGTG-
---------GCACGTGT
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

MNT/MA0825.1/Jaspar

Match Rank:4
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:CTGCCCCTCGCACGTG--
--------NGCACGTGNT
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.64
Offset:8
Orientation:forward strand
Alignment:CTGCCCCTCGCACGTG--
--------GGCACGTGTC
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.64
Offset:10
Orientation:reverse strand
Alignment:CTGCCCCTCGCACGTG--
----------CACGTGBN
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.64
Offset:10
Orientation:reverse strand
Alignment:CTGCCCCTCGCACGTG--
----------CACGTGNC
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.64
Offset:10
Orientation:reverse strand
Alignment:CTGCCCCTCGCACGTG
----------CACGTG
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:CTGCCCCTCGCACGTG--
--------NNCACGTGGT
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.63
Offset:10
Orientation:reverse strand
Alignment:CTGCCCCTCGCACGTG--
----------CACGTGDC
 A T G C A G C T A C T G G T A C A T G C A G T C A G T C A C G T T A G C A C T G A G T C C G T A A G T C A T C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C