Information for 6-GGGCACAGGCAGDGCG (Motif 23)

A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
Reverse Opposite:
A T G C A C T G A G T C G A C T A T G C A C G T A C T G A T G C A T G C C G A T A C T G A C G T A C T G A T G C A T G C A G T C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 29.1bp
Average Position of motif in Background60.6 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGCACAGGCAGDGCG
NNNNTTGGGCACNNCN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG
----ACAGGAAGTG--
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG
---AACAGGAAGT---
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG
----ACAGGAAGTG--
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG-
-AGNACAGNCTGTTCTN
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG
NAGNACANNNTGTNCT
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGGCACAGGCAGDGCG
NGTGGGCAT----------
 A C G T A C G T A C G T A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGCACAGGCAGDGCG
CCAGGAACAG--------
 A C G T A C G T A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG
-GCCACACCCA-----
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGCACAGGCAGDGCG-
GGGAACACGGTGTACCC
 A C T G A T C G A T C G G T A C C G T A A G T C C G T A A T C G A T C G T G A C C G T A A T C G C T G A A C T G G T A C T A C G A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C