Information for 2-GAACCATGTT (Motif 9)

A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C
p-value:1e-2
log p-value:-6.550e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background60.6 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAACCATGTT-
GCNGCCATCTTG
 A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAACCATGTT--
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAACCATGTT---
---CCATGTGCTT
 A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACCATGTT
GAACAATGG-
 A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAACCATGTT
VRAACAATGG-
 A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAACCATGTT-----
---SCHTGTTTACAT
 A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAACCATGTT-----
AATATACATGTAAAATT
 A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAACCATGTT---
AATGAACAATGGAATT
 A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAACCATGTT
NAACAAT---
 A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAACCATGTT--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T