Information for 5-TGATCCTTAC (Motif 11)

A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G A C T G C G T A A C G T A G T C C G T A
p-value:1e-2
log p-value:-6.550e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background55.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGATCCTTAC
ATAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGATCCTTAC--
TGACCTTTNCNT
 A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGATCCTTAC--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGATCCTTAC
NYTAATCCYB--
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TGATCCTTAC-
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TGATCCTTAC-
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGATCCTTAC---
--NNACTTACCTN
 A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGATCCTTAC
TTAATCCT---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TGATCCTTAC-
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGATCCTTAC
TTAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C G T C G T A A G T C
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T