Information for 1-ATATCCAHAATTVTAT (Motif 1)

C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
Reverse Opposite:
C G T A A G C T G T C A A G T C C G T A G T C A C G A T A G C T C A G T A C G T A C T G A C T G C G T A A C G T C G T A A G C T
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.776
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif12.12%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.2 +/- 4.8bp
Average Position of motif in Background32.1 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATATCCAHAATTVTAT
ACCCGTATCAAATTT-----
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATATCCAHAATTVTAT
GHATATKCAT--------
 A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATATCCAHAATTVTAT
TNNATTATGCATANNTT---
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATATCCAHAATTVTAT
AATAGGGTATCAATATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATATCCAHAATTVTAT
AAGATATCCTT--------
 A C G T A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATATCCAHAATTVTAT
-YATGCATATRCATRT
 C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATATCCAHAATTVTAT
AATGTATCAAT--------
 A C G T A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATATCCAHAATTVTAT
ATATGCAAAT------
 C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATATCCAHAATTVTAT
GAATATTCAT--------
 A C G T A C G T C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATATCCAHAATTVTAT
--ATCCAC--------
 C T G A A C G T C G T A A C G T A G T C G T A C C G T A G A C T T C G A C G T A A C G T A C G T T A C G A C G T C T G A A C G T
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T