Information for 4-TKTTSMCWWGGCCWTY (Motif 8)

C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
Reverse Opposite:
C T A G C G T A C G A T A C T G T C A G A G T C A G T C C G T A C G A T A C T G C A T G A T C G C G T A C G T A G T C A C G T A
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.4 +/- 19.3bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TKTTSMCWWGGCCWTY
NGTTGCCATGGCAA--
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TKTTSMCWWGGCCWTY
GGTTGCCATGGCAA--
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TKTTSMCWWGGCCWTY
------CTAGGCCT--
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TKTTSMCWWGGCCWTY
------CNAGGCCT--
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TKTTSMCWWGGCCWTY
----NTCAAGGTCA--
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TKTTSMCWWGGCCWTY
-GTTGCCATGGNAAC-
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TKTTSMCWWGGCCWTY
------CAAGGHCANV
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TKTTSMCWWGGCCWTY-
-GTTGCCATGGCAACCG
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T
A C G T C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TKTTSMCWWGGCCWTY
-GTTGCCATGGCAACM
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TKTTSMCWWGGCCWTY
----BTCAAGGTCA--
 C G A T C A G T A C G T A C G T A T G C G T A C A G T C C G T A C G A T A C T G A C T G A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T