Information for 6-ATATGAAATT (Motif 4)

G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T
Reverse Opposite:
G C T A T C G A A G C T G A C T A C G T A T G C G C T A C A G T C T G A C A G T
p-value:1e-12
log p-value:-2.809e+01
Information Content per bp:1.685
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.03%
Number of Background Sequences with motif654.1
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets48.3 +/- 26.8bp
Average Position of motif in Background47.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATATGAAATT---
TTGAATGAAATTCGA
 A C G T A C G T G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATATGAAATT-
-TTTGAAACCG
 G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATATGAAATT--
AAATAAGAAAAAAC
 A C G T A C G T G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATATGAAATT-
ACCCGTATCAAATTT
 A C G T A C G T A C G T A C G T G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATATGAAATT
ATATGCAAAT
 G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATATGAAATT---
ATATGCAAATNNN
 G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATATGAAATT
--ATTAAA--
 G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATATGAAATT
NATTGTGCAAT-
 A C G T A C G T G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATATGAAATT
TTATGCAAAT
 G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATATGAAATT-
-ACTGAAACCA
 G T C A G A C T G T C A C G A T T A C G G T C A C T G A T C G A A G C T C G A T A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A