Information for 6-CATGCCTTAC (Motif 6)

A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
Reverse Opposite:
A T C G A C G T G C T A C G T A A C T G A C T G A T G C G T C A A G C T A C T G
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets79.9 +/- 12.9bp
Average Position of motif in Background49.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CATGCCTTAC
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCCTTAC
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATGCCTTAC
ACATTCCA---
 A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CATGCCTTAC-
NGCANTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATGCCTTAC
CNAGGCCT---
 A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATGCCTTAC
CACATTCCAT--
 A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CATGCCTTAC-
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATGCCTTAC---
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCCTTAC--
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATGCCTTAC
CACATTCCAT--
 A C G T A C G T A G T C C T G A A C G T A T C G A G T C G T A C A C G T C G A T G T C A A T G C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T