Information for 3-RGAAGTGTTTGCAATA (Motif 3)

C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
Reverse Opposite:
A G C T C G T A C G A T A C G T A T C G A G T C G C T A T G C A C G T A A G T C C G T A G T A C G A C T C A G T A G T C A G T C
p-value:1e-18
log p-value:-4.314e+01
Information Content per bp:1.693
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.3 +/- 19.5bp
Average Position of motif in Background45.9 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA----
---NSTGTTTRCWCAGBNNN
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA-
--ANATTTTTGCAANTN
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RGAAGTGTTTGCAATA
-CCATTGTATGCAAAT
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA
---CBTGTTTAYAWW-
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA
-----TGTTTACH---
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA
-----TGTTTAC----
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA
NNGCGTGTGTGCNGCN
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA
-----TGTTTAC----
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGAAGTGTTTGCAATA-
NNNTTTGTTTACATTTN
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RGAAGTGTTTGCAATA
--NYYTGTTTACHN--
 C T A G A C T G G T C A C T G A A C T G A C G T C T A G A C G T A C G T C A G T C T A G T A G C G T C A C G T A A C G T T C G A
A C G T A C G T A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A A C G T A C G T