Information for 6-GCTAGCACAAGGG (Motif 20)

A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G C T A C G T A C T G A C G T A C T G A G T C A C G T C G T A A T C G A G T C
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 24.4bp
Average Position of motif in Background59.8 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCTAGCACAAGGG
-----AACAAAGG
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTAGCACAAGGG---
NNAGGGACAAGGGCNC
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTAGCACAAGGG---
-CTCACACAATGGCGC
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCTAGCACAAGGG-
----GAACAATGGN
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTAGCACAAGGG
---VRRACAAWGG
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTAGCACAAGGG
---AAAACAAAGG
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTAGCACAAGGG
CCAGGAACAG---
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTAGCACAAGGG
---AAAACAATGG
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTAGCACAAGGG
--AAGCACATGG-
 A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCTAGCACAAGGG
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A C T G A T G C A C G T C G T A A C T G A G T C C G T A A G T C C G T A C T G A A C T G C T A G A C T G
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T