Information for 14-DTTTBCGAAATGAHTA (Motif 18)

C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A
Reverse Opposite:
A G C T G T C A C G A T A C G T A T G C C G T A A C G T A C G T A G C T A T G C T C A G T A C G C G T A G T C A C G T A G A C T
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.755
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.4 +/- 27.8bp
Average Position of motif in Background47.5 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.61
Offset:9
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA---
---------ATGAATATTC
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.59
Offset:9
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA---
---------ATGMATATDC
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA--
----AAAAAATCGATAAT
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:DTTTBCGAAATGAHTA
--------AATTATT-
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA--
----AAAAAATCAATAAT
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA
-----HNRAATCAAT-
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A
A C G T A C G T A C G T A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:DTTTBCGAAATGAHTA--
------TTAATNATTAAC
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA--
-AAGGCGAAATCATCGCA
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:DTTTBCGAAATGAHTA--
----AAAAAATCGATAAT
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:DTTTBCGAAATGAHTA
-GTTGCGCAAT-----
 C G T A A C G T A C G T A C G T A T G C A G T C A T C G C T G A C G T A C G T A A C G T A T C G G T C A G C T A C A G T C T G A
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T