Information for 12-CTGGGACTAATVTAAD (Motif 15)

A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
Reverse Opposite:
G A T C C G A T A C G T C G T A A G T C C G T A C G A T C G A T C T G A A T C G A C G T A G T C G T A C A G T C G T C A A C T G
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.777
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 27.4bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGGGACTAATVTAAD
ACCGTGACTAATTNN--
 A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGGGACTAATVTAAD
AGAGGGGATTAATTTAT-
 A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGGGACTAATVTAAD
TGAAGGGATTAATCATC-
 A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C A C G T

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGGGACTAATVTAAD
TGTAGGGATTAATTGTC-
 A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGGGACTAATVTAAD
TAGAGGGATTAAATTTC-
 A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C A C G T

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGGACTAATVTAAD
-GGTGACTCATC----
 A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
A C G T C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGGGACTAATVTAAD----
----NANTATTATAATTNNN
 A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGGGACTAATVTAAD
TGGGGA----------
 A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGACTAATVTAAD
NNNNTGAGCACTGTNNG
 A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGGGACTAATVTAAD
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A T A G C A G C T C G T A G C T A A C G T T A C G A C G T G T C A C G T A C A T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T