Information for 6-TACWRCGGGATCTTGC (Motif 9)

C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
Reverse Opposite:
C T A G G T A C C T G A C T G A C T A G C G T A A G C T G A T C G A T C A G T C T A C G A G T C C G A T A C T G A G C T G C T A
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.621
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 26.4bp
Average Position of motif in Background57.4 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TACWRCGGGATCTTGC
------NGGATTAN--
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TACWRCGGGATCTTGC
---ANCAGGATGT---
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TACWRCGGGATCTTGC--
-GATGGGGTATCATTTTT
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TACWRCGGGATCTTGC--
-AATGGGGTATCACGTTT
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0016.1_Cux1_1/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TACWRCGGGATCTTGC--
-ACCGGTTGATCACCTGA
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C A C G T A C G T
A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

ZNF410/MA0752.1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TACWRCGGGATCTTGC
GANTATTATGGGATGGA--
 A C G T A C G T A C G T C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TACWRCGGGATCTTGC
GTACATCCGGATTTTT-
 A C G T C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:TACWRCGGGATCTTGC
-----NGGGATTA---
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TACWRCGGGATCTTGC--
-AATAGGGTATCATATAT
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TACWRCGGGATCTTGC
---ACCCGGATGTA--
 C G A T C T G A T G A C G C T A C T A G A T G C C T A G C T A G C A T G C T G A A C G T G A T C G A C T A G C T C A T G A G T C
A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T